Hi, welcome!

Santiago Coelho, PhD

Assistant Professor
Department of Radiology · NYU Grossman School of Medicine

Turning MRI into a noninvasive microscope of tissue microstructure.

Diffusion MRI Microstructure imaging Quantitative MRI Inverse problems Image reconstruction
Portrait of Santiago Coelho

About

About me

Hi, and welcome to my website! I am an Assistant Professor in the Department of Radiology at NYU Grossman School of Medicine, where I lead a research lab affiliated with the Center for Advanced Imaging Innovation and Research (CAI2R). Before starting my lab, I was a postdoctoral research fellow at CAI2R.

Originally from Argentina, I trained first as an electrical engineer and later pursued a PhD at the University of Leeds at the intersection of biomedical engineering and physics. My postdoctoral work at NYU further deepened my focus on MRI physics, mathematical modeling, and inverse problems. This multidisciplinary training shapes how I approach MRI: as both a physical measurement process and a computational inference problem.

My group develops physics-based and computational methods for quantitative and microstructural MRI. We are particularly interested in diffusion MRI, biophysical tissue modeling, optimal acquisition design, inverse problems, and image reconstruction.

A central theme of my research is understanding how tissue microstructure is encoded in MRI measurements and how that information can be recovered efficiently and robustly. This includes investigating non-standard diffusion encodings, characterizing the rotationally invariant information contained in diffusion signals, designing more informative and clinically feasible acquisitions, and jointly undersampling diffusion-encoding and image spaces to accelerate high-resolution microstructure imaging.

Our long-term goal is to transform MRI into a noninvasive microscope of tissue microstructure and to translate these advances into quantitative imaging tools that are useful in clinical research and, ultimately, patient care.

Research

Research interests

I develop physics-based and computational MRI methods to characterize brain tissue microstructure. My work spans biophysical modeling, acquisition design, inverse problems, and image reconstruction.

Microstructure imaging

I develop biophysical models and signal representations that translate diffusion MRI measurements into cellular-scale features of living tissue. My work focuses on the quantitative characterization of tissue microstructure in vivo.

Optimal acquisition design

I design clinically feasible diffusion and diffusion–relaxometry protocols that maximize information within limited scan time. This includes optimizing b-values, b-tensor shapes, echo times, diffusion times, and directional sampling to improve precision and reproducibility.

Inverse problems

Estimating nonlinear tissue parameters from noisy, incomplete MRI measurements is inherently ill-posed. I study model degeneracies and develop spatial, statistical, and machine-learning estimators that recover robust microstructure maps from practical acquisitions.

Image reconstruction

I develop MRI reconstruction methods that exploit structure across image space and diffusion-encoding space to recover high-resolution microstructural information from undersampled data. The goal is faster imaging without sacrificing spatial resolution or quantitative accuracy.

Publications

Selected publications

Full list on Google Scholar.

Talks

Invited talks & seminars

  • Feb 2026

    Where is Diffusion Neuroimaging Going?

    Invited speaker · 2026 CBI Science Day, NYU Grossman School of Medicine · New York, USA

  • Oct 2025

    What can you be with a PhD?

    Invited speaker · What Can You Be With a PhD Symposium · New York, USA

  • Oct 2025

    Brain microstructure imaging with diffusion MRI

    Invited seminar · BrainMap seminars, Martinos Center, Massachusetts General Hospital & Harvard University · Boston, USA

  • Oct 2025

    Diffusion MRI and tissue microstructure imaging

    Invited seminar · Department of Radiology, Cornell University · New York, USA

  • Sep 2025

    Diffusion MRI and microstructure imaging

    Invited seminar · Institute of Imaging Science, Vanderbilt University · Nashville, USA

  • Aug 2025

    Diffusion MRI and microstructure imaging

    Invited seminar · Department of Radiology, Columbia University · New York, USA

  • May 2025

    Diffusion MRI and microstructure imaging

    Invited seminar · BioMedical Engineering and Imaging Institute, Icahn School of Medicine at Mount Sinai · New York, USA

  • Oct 2024

    Geometry of the cumulant series

    Invited seminar · Diffusion Microclub Scientific Seminars · Virtual

  • Jun 2023

    Brain microstructure: biophysical models

    Invited educational talk · ISMRM Annual Meeting · Toronto, Canada

  • Dec 2021

    Brain microstructure: biophysical models

    Invited educational talk · Diffusion Study Group Virtual Workshop · Virtual

  • May 2021

    Brain microstructure: biophysical models

    Invited educational talk · ISMRM Annual Meeting · Virtual

  • Dec 2019

    Diffusion MRI and biophysical modeling

    Invited talk · Faculty of Engineering, National University of La Plata · La Plata, Argentina

Join the lab

Hiring

I am currently recruiting postdoctoral researchers and students interested in diffusion MRI, microstructure modeling, inverse problems, and image reconstruction.

Postdoctoral position

You can find the full position announcement below. If you are interested in joining the lab, please send me an email with your CV and a brief description of your research interests.

Contact

Get in touch

Location New York City, NY, USA
Find me online